Customized preprocessing wrapper. wrappers around makePreprocWrapper: Univariate only; Univariate + Cluster

Fun_lrn_univ_only_makePrep_MaG(learner, train_F, Predict_F,
  param.Univ.filt.top.n.features, parame.gene.or.module,
  param.LASSO.n.features.arbitrary)

Fun_lrn_univ_Clusters_All_makePrep_MaG(learner, train_F, Predict_F,
  param.Univ.filt.top.n.features, param.UnivClustRankTopN,
  param.cluster_method_KH, param.corrplot.n.clusters.k,
  param.corrplot.n.clusters.h, parame.gene.or.module,
  param.LASSO.n.features.arbitrary, param.assay.type.vec)

Arguments

learner

A learner

train_F

train_F

Predict_F

Predict_F

param.Univ.filt.top.n.features

param.Univ.filt.top.n.features

parame.gene.or.module

parame.gene.or.module

param.LASSO.n.features.arbitrary

param.LASSO.n.features.arbitrary

param.UnivClustRankTopN

param.UnivClustRankTopN

param.cluster_method_KH

param.cluster_method_KH

param.corrplot.n.clusters.k

param.corrplot.n.clusters.k

param.corrplot.n.clusters.h

param.corrplot.n.clusters.h

param.assay.type.vec

param.assay.type.vec

parame.gene.or.module

parame.gene.or.module

param.LASSO.n.features.arbitrary

param.LASSO.n.features.arbitrary

Value

learner custom preprocessing wrapper with makePreprocWrapper() of class 'PreprocWrapper'

Details

TBA

References

https://pat-s.github.io/mlr/articles/tutorial/devel/preproc.html#creating-the-preprocessing-wrapper

Examples

My_learner<-lrn
#> Error in eval(expr, envir, enclos): object 'lrn' not found
F_PreProc_1_Univ_Only_Train_MaG<-A
#> Error in eval(expr, envir, enclos): object 'A' not found
F_PreProc_3_UnivClust_Train_MaG<-B
#> Error in eval(expr, envir, enclos): object 'B' not found
Fun_lrn_univ_only_makePrep_MaG( learner = My_learner, train_F = F_PreProc_1_Univ_Only_Train_MaG, Predict_F = F_PreProc13_BOTH_Predict_MaG, param.Univ.filt.top.n.features = 10, parame.gene.or.module = 'gene', param.LASSO.n.features.arbitrary = '5')
#> Error in checkLearner(learner): object 'My_learner' not found
Fun_lrn_univ_Clusters_All_makePrep_MaG(learner = My_learner, train_F = F_PreProc_3_UnivClust_Train_MaG, Predict_F = F_PreProc13_BOTH_Predict_MaG, param.Univ.filt.top.n.features, param.UnivClustRankTopN, param.cluster_method_KH, param.corrplot.n.clusters.k, param.corrplot.n.clusters.h, parame.gene.or.module, param.LASSO.n.features.arbitrary, param.assay.type.vec)
#> Error in checkLearner(learner): object 'My_learner' not found