Wrapper_Filter_3_makePrep_MaG.Rd
Customized preprocessing wrapper. wrappers around makePreprocWrapper: Univariate only; Univariate + Cluster
Fun_lrn_univ_only_makePrep_MaG(learner, train_F, Predict_F, param.Univ.filt.top.n.features, parame.gene.or.module, param.LASSO.n.features.arbitrary) Fun_lrn_univ_Clusters_All_makePrep_MaG(learner, train_F, Predict_F, param.Univ.filt.top.n.features, param.UnivClustRankTopN, param.cluster_method_KH, param.corrplot.n.clusters.k, param.corrplot.n.clusters.h, parame.gene.or.module, param.LASSO.n.features.arbitrary, param.assay.type.vec)
learner | A learner |
---|---|
train_F | train_F |
Predict_F | Predict_F |
param.Univ.filt.top.n.features | param.Univ.filt.top.n.features |
parame.gene.or.module | parame.gene.or.module |
param.LASSO.n.features.arbitrary | param.LASSO.n.features.arbitrary |
param.UnivClustRankTopN | param.UnivClustRankTopN |
param.cluster_method_KH | param.cluster_method_KH |
param.corrplot.n.clusters.k | param.corrplot.n.clusters.k |
param.corrplot.n.clusters.h | param.corrplot.n.clusters.h |
param.assay.type.vec | param.assay.type.vec |
parame.gene.or.module | parame.gene.or.module |
param.LASSO.n.features.arbitrary | param.LASSO.n.features.arbitrary |
learner
custom preprocessing wrapper with makePreprocWrapper() of class 'PreprocWrapper'
TBA
https://pat-s.github.io/mlr/articles/tutorial/devel/preproc.html#creating-the-preprocessing-wrapper
My_learner<-lrn#> Error in eval(expr, envir, enclos): object 'lrn' not foundF_PreProc_1_Univ_Only_Train_MaG<-A#> Error in eval(expr, envir, enclos): object 'A' not foundF_PreProc_3_UnivClust_Train_MaG<-B#> Error in eval(expr, envir, enclos): object 'B' not foundFun_lrn_univ_only_makePrep_MaG( learner = My_learner, train_F = F_PreProc_1_Univ_Only_Train_MaG, Predict_F = F_PreProc13_BOTH_Predict_MaG, param.Univ.filt.top.n.features = 10, parame.gene.or.module = 'gene', param.LASSO.n.features.arbitrary = '5')#> Error in checkLearner(learner): object 'My_learner' not foundFun_lrn_univ_Clusters_All_makePrep_MaG(learner = My_learner, train_F = F_PreProc_3_UnivClust_Train_MaG, Predict_F = F_PreProc13_BOTH_Predict_MaG, param.Univ.filt.top.n.features, param.UnivClustRankTopN, param.cluster_method_KH, param.corrplot.n.clusters.k, param.corrplot.n.clusters.h, parame.gene.or.module, param.LASSO.n.features.arbitrary, param.assay.type.vec)#> Error in checkLearner(learner): object 'My_learner' not found