Bioc2mlr
Bioc2mlr: Bioconductor S4 assay data containers coversion into mlr's input
functional_to_NonFunctional_task_function() next_F() task_classif_to_Unsupervised()
functional_to_NonFunctional_task_function()
next_F()
task_classif_to_Unsupervised()
Functionals
Fun_MAE_to_taskFunc()
Convert MAE to mlr task
Fun_SE_to_taskFunc()
Convert SE to mlr task
limmaCPO()
Add together two numbers
whole_run_function() whole_run_MLR_function()
whole_run_function()
whole_run_MLR_function()
Helper post_processing functions
Func_update_args_univ_clusters() getTaskSubjectId() Func_extract_feature_name() Filter_M_Limma_eBayes_gene_REV_function() Filter_M_glm_gene_REV_function() Fun_Load_module_sets() F_assay_i_module_row_index() Filter_M_Limma_camera_Module_REV_function() Func_task_to_Passed_Features_DF_MaG() Func_Collapse_Data_by_module_names() cvglmnet_alternative_lambda.min_function()
Func_update_args_univ_clusters()
getTaskSubjectId()
Func_extract_feature_name()
Filter_M_Limma_eBayes_gene_REV_function()
Filter_M_glm_gene_REV_function()
Fun_Load_module_sets()
F_assay_i_module_row_index()
Filter_M_Limma_camera_Module_REV_function()
Func_task_to_Passed_Features_DF_MaG()
Func_Collapse_Data_by_module_names()
cvglmnet_alternative_lambda.min_function()
Helper functions
F_PreProc_1_Univ_Only_Train_MaG() F_PreProc_3_UnivClust_Train_MaG() F_PreProc13_BOTH_Predict_MaG()
F_PreProc_1_Univ_Only_Train_MaG()
F_PreProc_3_UnivClust_Train_MaG()
F_PreProc13_BOTH_Predict_MaG()
Customized train and predict functions for a customized preprocessing wrapper
Fun_lrn_univ_only_makePrep_MaG() Fun_lrn_univ_Clusters_All_makePrep_MaG()
Fun_lrn_univ_only_makePrep_MaG()
Fun_lrn_univ_Clusters_All_makePrep_MaG()
Customized preprocessing wrapper. wrappers around makePreprocWrapper: Univariate only; Univariate + Cluster